rs36374824 SNP Detail

Summary

• ID
  rs36374824
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:31219062 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTCTATG AGTTCCAGGA
  CAGCCAGGGC TATACAGAGA AATCCCTGTC TCGAACCCTC CTCCCCCCCC CCCCAAAAAA
  AGAATGTTTG CTGTGTTGCT TTTATACACA CAGTTTTTAT ATACACAGTT CTGGTATTAC
  CTTATTATGG ATGGTGAGAT GTTAATTGTG TGCCTGACAC TTGGAAGAAG GGATTGTCTT
  R
  CATTAACATA AGAGAGTGTA AGTTTCAGAG AGTATATAAG TTTCAGCTCC CTGTACTAAA
  TGATGGTATA GTTGAAGGCA GCGTATATAG AGGTGTTTCT GAGTTGATAA CTATTGGGTG
  AGAGCATTTG GGGCTCATTA TTACCGTGAA TGAAGCATAT GAAGTTTTCT ATGACAAAGT
  CTTTTAGAAT TGTAAATGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51508753	NES14639840	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	G	A	G	A	A	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36374824					SNP	G	A	A	A	G	A	G	A	A	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51508753	NES14639840	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:31219062 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6292	CpG island 6292	1347 bp distal
Eaf1	ELL associated factor 1	within coordinates
Tssr124945	transcription start site region 124945	1924 bp downstream
Tssr124946	transcription start site region 124946	682 bp downstream