rs36375331 SNP Detail

Summary

• ID
  rs36375331
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:41021320 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTGTAAT TACTGCTAGT
  GATGATTAAT TAAAAGGAAA AATGTCAATG GTACTGATTA ACAGTAATGG CTACACTTCT
  TTCTTAACTT GTAAAATTCA AAGGCAAAGA GAATGCTAAG CTCTGGAACA GGCTAATGTC
  CACAGCTCCT GTATACTTTT GGCTGCCAAG AGGCTCAGTC TTGGCTCCTA CCTTCCCTGA
  R
  GATCCTCCAT GAACTGAACT CTCTGGATTG AGTCTGTTCT CTCCAACACG AATTTAACAC
  CCAGCTATTC TATGTGCCAT AGAAAGCTGG TTCCTAAAAC ATGAAAGAGA AGAGATGCTA
  AGTTCCTTGG GTAGTTCTGA ACATCGAAGA ACAGGATGTT GAATTTATTC TGTCACCAGC
  ATCCTAGACT TTAGAGCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
ss50828450	NES13536770	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
rs36375331					SNP	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50828450	NES13536770	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:41021320 () rs orientation: forward

Symbol	Name	Function Class
Dntt	deoxynucleotidyltransferase, terminal	within coordinates
Rr370497	regulatory region 370497	1597 bp downstream
Tssr5510	transcription start site region 5510	1665 bp upstream
Tssr159242	transcription start site region 159242	1745 bp upstream
Tssr159243	transcription start site region 159243	1718 bp upstream
Tssr159244	transcription start site region 159244	1701 bp upstream
Tssr159245	transcription start site region 159245	1688 bp upstream
Tssr159246	transcription start site region 159246	826 bp upstream
Tssr159247	transcription start site region 159247	814 bp upstream