rs36377521 SNP Detail

Summary

• ID
  rs36377521
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35745621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTCCCAG AAGCTATGTT
  GCTTCTGCTG CCTGCGTGCT CTCCTGTGAA GACTTGTCTC TTTGGGATCT GGGATACAAG
  ATGGCATTCT CACCTGGTCT CATGGACAGA GAGACTAGAC AGTAGTTTAT GTGGCAATCC
  TCCATGCTCT AAAGAATGAA CATGTCAGTA TCTTTCAGAG TTTATTCAAC ACCAAACACA
  R
  CTCTTCTGCT GGGATACCTC AGGAGATAAT CCTTGTCTGG CTAGGATGTC TGCTTGGGCT
  ATTTGAAATC CACTCTGCTT TCTAATGTTG TGAAGACTGC CTCTTCAATT GTGCTTGTAG
  TGATCATCTG TAGTATCTGT AGAGAGTCCC AACCAACCAT GCTGCTGTGA GAGAGTCTGC
  CAGCAAAAGA GCTAATTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50672088	NES14009031	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36377521					SNP	G	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50672088	NES14009031	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:35745621 () rs orientation: forward

Symbol	Name	Function Class
Gm36974	predicted gene, 36974	1062 bp upstream