rs36386433 SNP Detail

Summary

• ID
  rs36386433
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5901868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCCAGGACA GCTCCACTCC CAGAACTAGC TCTTCCCAGG
  AGCAGTCAAG GCTGCCAGGG GTGCAGAGCT GGGGACAGAT AGGCCTTTGC GATGTCCTTC
  R
  GAGAGAGGTG GCTTGAGCCG CTGTGGCTGG CCTCAGGGAA TCCCACAGTG CAGTGCAATT
  CGGAGTTGCC ACGCCCCAGG CTTTATCAGC TCAGAGCACA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss50577050	NES13648067	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs36386433					SNP	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50577050	NES13648067	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5901868 () rs orientation: forward

Symbol	Name	Function Class
Frmd8	FERM domain containing 8	within coordinates
Frmd8os	FERM domain containing 8, opposite strand	468 bp downstream
Rr370436	regulatory region 370436	779 bp downstream
Tssr157784	transcription start site region 157784	1879 bp upstream
Tssr157785	transcription start site region 157785	1826 bp upstream