rs36405336 SNP Detail

Summary

• ID
  rs36405336
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:55173199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGGCTTTT GCTTCAGTTC
  CTGCCTCCAG GATCCTGCCC CAACTTCCTT TCAAGATGAA GAGTAACCTT TCCTTCCAAA
  GTTGCTTTTA GTCATTGTGT TTATCACAGC AACAGAAACC TAACTTAGTC TAATTATGCT
  CTCAGGAAGA AGACACAGGC TCAGTGCCTG CAGGATATCT GCAGCAATAT TGTATTCTTT
  M
  ATTATAGATG TCAGCAATTT TATTTATTCT TTCCTGGGTT CTGAAGCAGA AGTATTTCCA
  TGAGTTTGGG GCCAGCCTGG GCTACACCGT AAGTTCCAGG CTAGCTTGGG ATATAATATG
  AATTCTTGTC TCTAAAATAC TTTGTAATAA GAGAACATAT TTTATGGCAA GGGTCAGAAT
  ATGTATTCTG TTAAGAAAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52018576	NES15035333	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36405336					SNP	A	A	A	A	A	C	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52018576	NES15035333	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:55173199 () rs orientation: forward

Symbol	Name	Function Class
Nrg4	neuregulin 4	within coordinates
Rr200783	regulatory region 200783	999 bp distal
Rr200784	regulatory region 200784	399 bp distal
Rr204198	regulatory region 204198	749 bp distal