rs36416803 SNP Detail

Summary

• ID
  rs36416803
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45511273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCAGCTA ATTAGGAGTC
  TCTGCTCAAA AAGCATCCCG CTTTCTGTCC TTCGAAAAGA CCAGGAACTC ATCCCCACTC
  CTTGGGGACC CCTTCTCCTG TCCCCTTGAA CTTCTGACTT GCCTTGAGAG TCTTGTTCGC
  TTGCAAAAAT GTGCCTCTTC CAGGAAGGCT ACCTGGATTC ACCTGCTTGC TTCCAACTGT
  S
  CCTTTTCTAT GAAATCAAAA GTGCCCTTGA GTCTTTTTAT AGGACACCTA CAATTATCAA
  TGGAATGTCA GAACACCTGT CCCCTGTTTG CAGCCACAGA GCCACCAGAG CGGAAAAAAT
  CATCTGGAGT GAAGATTTCC TTTAGAATCT GATAAATGAG AGAAGGAGGG GCAGGAGTGC
  ATGGACCCTC TATTCAGAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52012087	NES15026933	PERLEGEN	MM_PANEL2	f	SNP	G		C	C	C	C	C	C	C	C	G	G	C	C	G	C
ss136415389	ENSMUSSNP2676403	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36416803					SNP	G	G	C	C	C	C	C	C	C	C	G	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52012087	NES15026933	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45511273 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates