rs36419235 SNP Detail

Summary

• ID
  rs36419235
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:83078578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAGCAAA GTCCCACATT
  AATAACCTCT TCCATACAGA AGAGCAGTTT TATTGTTCCA ATGCTGTTTA GAGCTGGAAA
  AAAAATGTCT GCAAGACTCA TATCTTATTT GATTTTACTT CAATAAATTT TTATATTAAA
  TTGAAGTTTG TGGACAGTAC ACTGCCAGCA GACAACAATG ACACTTGCCC TCAGCATCCA
  S
  ACAACTGATC GATGTTGGAG AATGGTTCTC TGCCTATAGA GAAATCTCCT TGCACTAACA
  GCCCTCAGTC AAGCTCCAAA TGACTTGGCT GGAGCGTGCA TGGAAACACT GCACGCATGA
  ACAGCAAGAG TCTTCTGGAA CAGTTATGGA CCACTCAAGT GCTTGTCTTG TCTTGGGAGA
  AGTGATTTCG TAGCTTCCAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss51971201	NES14983446	PERLEGEN	MM_PANEL2	f	SNP	G	C	C	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs36419235					SNP	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51971201	NES14983446	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83078578 () rs orientation: forward

Symbol	Name	Function Class
Il15	interleukin 15	within coordinates
Rr382378	regulatory region 382378	1009 bp downstream
Rr400995	regulatory region 400995	397 bp downstream
Rr666114	regulatory region 666114	297 bp distal
Rr666115	regulatory region 666115	504 bp distal
Tssr81943	transcription start site region 81943	1459 bp downstream
Tssr81944	transcription start site region 81944	1503 bp downstream
Tssr81945	transcription start site region 81945	1546 bp downstream
Tssr81946	transcription start site region 81946	1601 bp downstream