rs36422360 SNP Detail

Summary

• ID
  rs36422360
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:114971335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAGGCCA TAGAATACCT
  GTCCCTCCAG AAGGGAGAGG CCAATTAACA CTCCTCAGAC CACAAGGGGG AACACACCTG
  CGGGTGGGGA CACATTCCAC AGGAGGGACC ATTACCCACC TTCAGACAAG GGAAGACTTT
  GTCACCTCAT TCCCTAAAGA AATGGTTGCT AGAGTAATAA AAGTTAAAAA CAGCTGTGGC
  Y
  AGTATGGGCC TGATGCCCTT TTTTACACAA GCTTTATTGG ATATAGTGGT AGAAAAAAAA
  TGCAGCCAGT AGAAATTGTA CCCTTATACA TTCAGAGTCT GGGTCGGGCT ACTGCCTTGC
  AGGGGGAGTA CAGTACAAAC AATGCTTTCA CAGCACCTAG ATAATAAGGA AGGTTTTAAG
  TATGGGGGCA TAAATCTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ
ss51008716	NES13916998	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ
rs36422360					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51008716	NES13916998	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:114971335 () rs orientation: forward

Symbol	Name	Function Class
Rr375604	regulatory region 375604	within coordinates