rs36423089 SNP Detail

Summary

• ID
  rs36423089
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11044869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAAATAA AAAAAAGGAA
  AAAAATGACT GAATGACTGG CAAAGGAAAG TTTGGAAGAT GAAATAGCCA TTTCTCCATC
  CTAAAAACTC CTGAAGGCAG GGATTTCATG AATGTGAGTA CACAAAGGCT AGTGTAGGGA
  TGTCTGACAT CATACAGATG CATGTGTCCT GCTAGAGCAT CTTTATTTGA ATCCATTTCA
  R
  TCTCCCATCT CGTTTTAATA GAGATTTTTC CAGGGTGAGT TGAAGCAAGA GTCTATAATT
  TAGGCCACAA GAAAGATATT TACCCTTCGT CAGGAAAGGA AGAACTTGGT TTATAGGAGT
  CTAGGTAGGA GAGGATGTCA CTTGGTCTCT AGAATCTTCA GGTTCACTTA TCTGGAGTCT
  TGAACTACTT CGGAATAACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50598034	NES13634581	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36423089					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50598034	NES13634581	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11044869 () rs orientation: forward

Symbol	Name	Function Class
Ms4a8a	membrane-spanning 4-domains, subfamily A, member 8A	within coordinates
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates