rs36426228 SNP Detail

Summary

• ID
  rs36426228
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:26416339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAGGAAG GTCGGCCAAA
  TGTTGTAGTC AGGAACATGA CAGGAAATTA TTAGAGATAT TTTGATAAAC AGCAAATGAA
  AGTGAAAAGT GGTGCTACTG CAGAAATGCA TGGATGACCA GACAGTTTTT GTTTTGTTTT
  TTGTTTTGTT TTGAAGACAG GGTCTTTCAG ATCTATACCA CTTTGATTTG CTGCTTGATA
  W
  AATATACTGC CTCAAAGTTC CCAACCACAG GACTATATTA ATAACAATGA AAGTAGACCT
  TCTACGTATT TCTTTAAAAA CAAGCAAACA AAAACAGGAC TGGAGTTTAT GTGATATATT
  TATTTTCCTC AGCTTCTGTC ATGCCACCAG CATTGTGATG GCCTCTTAAG TATTTCTGGT
  GCTCATTCCA TGTGACTGTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51506122	NES14640568	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36426228					SNP	A	A	A	A	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51506122	NES14640568	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:26416339 () rs orientation: forward

Symbol	Name	Function Class
Dnah12	dynein, axonemal, heavy chain 12	within coordinates
Gm62888	predicted gene, 62888	1911 bp upstream
Tssr124708	transcription start site region 124708	1922 bp downstream
Tssr124709	transcription start site region 124709	1907 bp downstream
Tssr124710	transcription start site region 124710	1888 bp downstream