rs36426419 SNP Detail

Summary

• ID
  rs36426419
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:11955933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAGCTTG CCTTCAAGAT
  GCACATACAC CCTGAAATTT TAAGTGGCAG AATTAAAATG TTTTTTGTAA CAGTTTGGAA
  AAAATTATCT GAGACATATA CAGGCCTCTT AGGTAAAAGA TATCAAGAAA GTTCGCTTTT
  ACTTTCTAGT AGCCAATAGA AAGACAGCAT GTAGTTTAGG AGAATTTGGA CTCACTCATA
  D
  TGCATGCCCA TTCATTTTTA TTTGTAGAAC AGCCAAATCA TTATAAAAGT CACCCTCACG
  TCCCTCTGGG CTAAATACTA ATGTCTAATT ATGCAAAGTT GTTTGTATTC ACCTTTAGGT
  CAAATCTGGG CCGTGGGTAT CATTCTTATG ATTACTAATA ATGGTAATTG ATTGTTGGGC
  CCAAAGAATT GTCAGAAGGG                                            
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51583111	NES14600886	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	G	T	T	G	G		T	T	G
ss147079576	ENSMUSSNP625469	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						T				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36426419					SNP	T	T	T	T	T	T	T	G	T	T	G	G	A	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51583111	NES14600886	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:11955933 () rs orientation: forward

Symbol	Name	Function Class
Gm34618	predicted gene, 34618	within coordinates