rs36429848 SNP Detail

Summary

• ID
  rs36429848
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70871781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACACAC ACACACACAC
  ACACACACAC ATCCCTGTTC CATCATGGTG GAGATGCAGT TGAGGGAAGA GCACTTATCA
  GAAAGGATGC TTTTGATTGA ACAAAGAAGT CAATATGCTT TAGTTTGAGT TGAAGTATTT
  AAGCTATGTC ACAGGACCCA AGATCAGGAG CCAGCAGTCC TGTAGGCAGA GGCGACTCAG
  R
  GAGCAGGCTG GCATCAAGAC TCACTCTATT CTTCCTGACT CCCCATTTGA GCTTTCTTTG
  TTTTAATGGT CCACGTGGAT AAAGAAAATA AAGTCTTTAT TCTGTAGCAC ATGCCCAGCA
  TGTTTGGGAT TTTGACACCT GGAGAGTAAT TACCTTAGTC TTAAAGTTCT GGGGGAAGAG
  ACTTGGATCA GCCCCTGCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50736518	NES14247208	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36429848					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50736518	NES14247208	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70871781 () rs orientation: forward

Symbol	Name	Function Class
Rr682460	regulatory region 682460	1468 bp distal
Rr682461	regulatory region 682461	653 bp distal
Rr682462	regulatory region 682462	563 bp proximal
Rr682463	regulatory region 682463	1693 bp proximal