rs36430472 SNP Detail

Summary

• ID
  rs36430472
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:97598982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAAAGACTG CTGGGTTACC
  TTTGCTGGGA CAGGAATATG GCTGCACAGC GGCAATCTCC TAAGTGCTGT GTTACAGAGG
  CTCGGGAAAG AAAGGAGTCG TCAGAGAATG AAGGGAAATT AGACCAAGAC AAAAGAGTGT
  CCTACATTAC AGCCCAGCCC CCTGTCCTTT CTGCATGGGC CTTAGCACTG CGGCAGATGC
  R
  ATTAGGAAGT GTCTGAGGAG AGGCTCAGCT GCGCTGGCAG TGGCAAGTCT ACCCTCAGAG
  GATAGTTTCT GATCCTTACG CCACATCATC TGCACCAAGT CTTTTCTCAC ACTGCTGCCA
  GGGAAAGAGG CCAGCCACAC TTAGCATTTG TGATAATCAT AGAGAACCAG CCAGAGATTG
  GCTATCTTCC CCCTCAAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50996626	NES13919774	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36430472					SNP	G	G	G	G	G	G	A	G	G	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50996626	NES13919774	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:97598982 () rs orientation: forward

Symbol	Name	Function Class
Gm66506	predicted gene, 66506	507 bp downstream
Mir7225	microRNA 7225	1104 bp upstream
Pde4dip	phosphodiesterase 4D interacting protein (myomegalin)	within coordinates
Tssr30803	transcription start site region 30803	827 bp downstream