rs36432023 SNP Detail

Summary

• ID
  rs36432023
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32664321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGAGTGACT TGGGAGTCCT GGGCTGAGAA TGGGCGAGAG
  AAAATGCTGG GATTGTGATC CTGTAGGCCC AGATTTCTAG CTCAGCTCTG CTGCTTGCTG
  Y
  GTGTGCGACC TATGATGCAG CCAGCCCGAG CTTCTGTCTC ATCATTGGCA GAGCCCAAAG
  TGTGTACACT TTCTGGGACA AACTGATGTA TATATAAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss50669027	NES14018998	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	T	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36432023					SNP	C	C	C	T	C	C	T	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50669027	NES14018998	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32664321 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Tssr84300	transcription start site region 84300	165 bp downstream
Tssr84301	transcription start site region 84301	1432 bp upstream
Tssr84302	transcription start site region 84302	1621 bp upstream
Tssr84303	transcription start site region 84303	1735 bp upstream