rs36434732 SNP Detail

Summary

• ID
  rs36434732
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:66683205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCTGATAA AGGAAAAAAT
  AAGCAGACTT TCAGAGAGGC AAAGGAGTTT GCCCAGAGTA GCACAGTCCT TTGATGGCAA
  ACCTGAATTT TTTTCCTAGG TACTCCAATC CTAGATCTGT TTAAAAGGGG GCTATCCAAG
  TAGATTTCAG TGTGTCTGTT CCACAAATTA TCACTACACT TCTAGAGTAT GCTAAGTATC
  R
  TGAATAACAT CCAGTAACTG GAAAATATAT TCTATCAGAA GTTGCCAGAA CTCCCATTCC
  TCCCACTGCC ACACAGCTCA GTTGAATAGT CTTGCAACTC AGCATCTTCT AGCAACCCTT
  AAAAGGCAAC AAGACCTTTG TCCGTCGTCC TTTGTACTCA CCAAGACTCT TTCTTTCCCT
  GTGAAGGCCC TTAGAGCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51709128	NES14574193	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36434732					SNP	A	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51709128	NES14574193	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:66683205 () rs orientation: forward

Symbol	Name	Function Class
Rr503566	regulatory region 503566	959 bp distal
Rr503567	regulatory region 503567	382 bp distal
Rr503568	regulatory region 503568	within coordinates
Rr503569	regulatory region 503569	549 bp proximal
Rr503570	regulatory region 503570	1227 bp proximal
Sla	src-like adaptor	within coordinates
Tg	thyroglobulin	within coordinates
Tssr131484	transcription start site region 131484	878 bp upstream
Tssr131485	transcription start site region 131485	1004 bp upstream
Tssr134583	transcription start site region 134583	1213 bp upstream
Tssr134584	transcription start site region 134584	729 bp upstream
Tssr134585	transcription start site region 134585	702 bp downstream
Tssr134586	transcription start site region 134586	756 bp downstream
Tssr134587	transcription start site region 134587	831 bp downstream
Tssr134588	transcription start site region 134588	1281 bp downstream
Tssr134589	transcription start site region 134589	1303 bp downstream
Tssr134590	transcription start site region 134590	1329 bp downstream
Tssr134591	transcription start site region 134591	1360 bp downstream
Tssr134592	transcription start site region 134592	1841 bp downstream