rs36436065 SNP Detail

Summary

• ID
  rs36436065
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:87406362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTCAACA CACTGCTGCA
  GAGCATGAAG AACGAGTTTC TCAAGACGCT GAACTTGTCG GACATTCCTG TGCAGGACAC
  GGGCAGAGTG GATCCACCAG AGTACATGCT GGAGCTCTAC AACAAATTCG CCACAGACCG
  GACCTCCATG CCGTCTGCTA ACATCATCCG GAGCTTCAAG AACGAAGGTA GGCTGGCTTG
  Y
  GCGTACACAC GGGAGGCTTT GGCTTTGGCT TTTCTCAGGA AGAAATAAGG AAATGTCCCT
  GTGGGGGTGA TGTGGGAGAG GATGCACTCG TGGAAACGCA TGGCTCGGAC ACAGTGCATC
  GACTGTACCA CACGATCCTC CCAGAACTCC AAAAGTGCTG GAAAATATCT ATTAATGAAA
  ACCCACAGAA TACCCATCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51740629	NES14797041	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36436065					SNP	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51740629	NES14797041	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:87406362 () rs orientation: forward

Symbol	Name	Function Class
Bmp10	bone morphogenetic protein 10	within coordinates
Gm66434	predicted gene, 66434	within coordinates
Tssr57543	transcription start site region 57543	380 bp downstream
Tssr57544	transcription start site region 57544	293 bp downstream