rs36441027 SNP Detail

Summary

• ID
  rs36441027
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:93205231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGT ACTCCGAATG GTGTAGCTTG
  S
  ATATGGCTAA GGATGTCAGC AGCTA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51751746	NES14555264	PERLEGEN	MM_PANEL2	f	SNP			C	C	C		C	G	G	G		C
ss148380804	ENSMUSSNP2952714	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss325065602	CHEV_15_93137781	CHEVERUD	SCREENING_POP	f	SNP						C					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36441027					SNP	C	G	C	C	C	C	C	G	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51751746	NES14555264	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:93205231 () rs orientation: forward

Symbol	Name	Function Class
Gm52193	predicted gene, 52193	within coordinates
Yaf2	YY1 associated factor 2	within coordinates