rs36452414 SNP Detail

Summary

• ID
  rs36452414
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16405399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACAGGATC TTGTGCAAGG
  TCGCACGGGA AAAAATGCCA GACTCAGGAC AAGAAACTCA ATACATGGGG CCTTTATGTC
  CATGGATTTT TACATCTGAG CATCAAAAAA ATATACAGAT GAAAACTGTC CCAAACCATA
  CATCTACAGC AAAACATATC CAGTCTGATA CCCTGCCATT TTTCCAACTT CAAGCAGATA
  S
  ATAGGGTCTA GGCAGCCCAG GGCTTAGGCA CCAGGAAGGA TTTGAGCTGT GGGAAGATGT
  GACTAGCTCT AGGCGAGCAC AGCAGCGTTT TTTAACAGGG GACTGTGAGC ATCTGCGGCT
  TTTGGTGAGC GTAAGGCATC CGAGCAGTTC CCTCTGGATC CTGAGGGCGG GTCCACTTGT
  GATTCAGAGC CTGGGCCCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51469873	NES13978612	PERLEGEN	MM_PANEL2	f	SNP	C		G	G	C	C	G	G	G	C	G	G	C	G
ss148392634	ENSMUSSNP5512579	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36452414					SNP	C	C	G	G	C	C	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51469873	NES13978612	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16405399 () rs orientation: forward

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	within coordinates