rs36454023 SNP Detail

Summary

• ID
  rs36454023
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:53018258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTAGCCTC ATCACTACCC
  AGAGGTGCCC CTTCCCAAGA GACATATCTG TAAAGGACAA ACAACTCGAT GGTGAATGGG
  GAAGGGGGCA TAAAACCTGA TGCATCTGTA AACTCTGAGG ACATGCAAAG GAGACGACAC
  CTCTGGGAGA AGCAAGACTG TTTAACACTC CTCAAAGTCT TCCAGTTGTA ACGGCCGTGT
  M
  CTAGAAGCAG CTACTTCAAC GCCTTTGTTT TAAGTAAACC CACAAATGTT TTACTGTGAT
  AACTTGTAAG TACATCCAAG GGTGTGATGC CTCATACAAC ATTTGAGGAC GGGTCTGAGT
  GACTACACAC TGTGACGTAG CCTGGTGAGG GGCTATGATT ATATATATGT TTTAGATGCT
  TAACATCTTC TACAAACCTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51117971	NES14342444	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36454023					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51117971	NES14342444	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53018258 () rs orientation: forward

Symbol	Name	Function Class
Auh	AU RNA binding protein/enoyl-coenzyme A hydratase	within coordinates
Rr284124	regulatory region 284124	1344 bp proximal