rs36464594 SNP Detail

Summary

• ID
  rs36464594
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103976685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGGTCTCC CCGCTCCTGA
  TTGGCTGGGG GCTTTGGTAA TTGCCCAATA TCTGTCAATG CTGATACAAG CCAGGAACTG
  CATCCCAGAG ACAAAGTTTA CCGTGTACAG GGCTGACGTT ACTTTGCACA TCATTTTGCC
  TAGAATCCAT CCGTGAACTG CATTAACTGC CCAGAAAGGC AGCGTGATCA GAAGTAACAA
  R
  TCTGCTACAG CCAGGTTCAG GATGTACACA TCGGTCTTGG TCCTCTGCTT CTTGTAATAG
  GCGTAAATCG CCACAACTAC GGAGTTCCCT GCGAGCCCAG TGACAAAGGC CACTGTGAAG
  AAGGCAGGCA GGAAGACTTT TGCGAACTGC CTGACCTCTT CTTTTATGCA GATCACTTCG
  TACTGGCTGT AGTCGTGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50790577	NES14206611	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36464594					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50790577	NES14206611	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103976685 () rs orientation: forward

Symbol	Name	Function Class
Acad11	acyl-Coenzyme A dehydrogenase family, member 11	within coordinates
Ackr4	atypical chemokine receptor 4	within coordinates
Gm47000	predicted gene, 47000	1649 bp upstream
Rr686042	regulatory region 686042	910 bp distal