rs36481639 SNP Detail

Summary

• ID
  rs36481639
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129124518 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTCACCTC TCACAGGGCA
  GTGGTTTTGT GAATTCAAGG AAGGAGCTTA CACCGTTTAC CAAGAACTGA TAAAAGCCAC
  TGGGTCACGT GAATATCAGA TAGAAAGTAA TAGATTAGGT AGAATATATT AGTTTTATAA
  TTATAATTAT TTAATGTATA TTTTAAACAC TTCTGCTTGG GACACTGCAG GGAAGAAAAA
  Y
  ACTTGTGGCT GCCTGTTATG TGGTAAAGGC TTGGTTAGCA TTACTATTGC CTGCTTAGTG
  ATAGTTGGCA GCTCCAAGGT TTATCCATAT GCCATCACTG ATCCAGGTTT TAAGCATTCC
  CCGAAAGCCT AGTTAGAAAC ATAGTTCTGA TCACAGAAGA AGAGAAAACA CAGCCAGGCT
  TTTCTTCTTA GATGAACACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51623321	NES14655999	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	C	T	T	T	T		T	T	C	T
ss135885740	ENSMUSSNP3791465	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36481639					SNP	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623321	NES14655999	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129124518 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	within coordinates
Tssr1044	transcription start site region 1044	1404 bp downstream
Tssr1045	transcription start site region 1045	1655 bp downstream
Tssr35615	transcription start site region 35615	1844 bp downstream