rs36489074 SNP Detail

Summary

• ID
  rs36489074
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119128282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAATCTCCT CCCCCCTCCA
  TAACACCTGT TCCAGTTACG CTTCTCTTCT GAATAGACAC AAATGCCATG CAAGCATCTA
  TCACCCTCAC TTAATTCTCC AACAATCTCC TTAACCACCT ATCAAGTCTA CCCTTGCCGA
  CGAGATTGCT CCTTCAACGT GTTTCACAGT CAGCCAAGCC TTCCTTCCTT CTTTTCTCTC
  M
  TGTTTTAAAA ATGGGGTCTG CCTGTAGACT AGGCTGGCCT GGAACTCAGT GATCCACCTG
  CTTTTACCTC CTGTGGATGG GATCAGTGCT ATGCACGCCC ACGTCGTGCA CAACTTTATT
  TACTTAATTT ATTGGTTAGG CTTGAACCTA GAGCCTCACA TGATAGACAG GCACTGTACT
  GTGTCTTTAG CTTTTAAATT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss50801031	NES14205836	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A		C	A	A	C
ss323218642	CHEV_9_119208334	CHEVERUD	SCREENING_POP	f	SNP								C					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs36489074					SNP	A	A	A	A	A	A	A	C	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50801031	NES14205836	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119128282 () rs orientation: forward

Symbol	Name	Function Class
Oxsr1	oxidative-stress responsive 1	within coordinates