rs36491673 SNP Detail

Summary

• ID
  rs36491673
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:35699775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATACCTTGT ACACACGGTA
  GCCACTTTTA AAGAATTAGC ATCATGATCC TTTCTAAGCC AGGTTGTTCC TGATGCAAGC
  CCGGATTAAA AGTGCCCAGA ATGTGTTGTT TTGTTTTCTT AAAACCTGAG TTCATTAAAA
  AATGAAAACT TGTCAAACTT AAAACTCTGA ATATAATATA AAGAATGACC AACTTACTGT
  R
  ATTCATTATG CATGTAAGAA ACATATAAAT AGACCTGGAG AGACAATGAG AACTGGCCCT
  GCGTTCAGAC CCTGCAATGA AAAGTTTTCC TTAGTACTAA TTTATTTTCT TGAGCTTAGG
  AATTGCTGAA AGTAAGTTTA GGCTATACAA GCTTAGGAGT AAGGGAAACT AGCATAAAAG
  GTAGATGTTG AGTAACCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51633346	NES14588642	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36491673					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51633346	NES14588642	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:35699775 () rs orientation: forward

Symbol	Name	Function Class
Rr647	regulatory region 647	1740 bp proximal
Rr309492	regulatory region 309492	1596 bp proximal
Vps13b	vacuolar protein sorting 13B	within coordinates