rs36495365 SNP Detail

Summary

• ID
  rs36495365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:96536573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCATAGGC TTTCATTGAA
  AAAATTTTTA AATGTGTATT AAATATTGAC TATACCCAAA TACATAGCAG TAAACTCTGC
  CCGTTGATAC TGGGTGTCAT ATTGATTGAA GACATATACA TATAAAGAAA ACAGATGAAA
  ATTCCAGGCT CTCAATCAGC TCACAACTTA ATGGGAGTAA CATAGTAAAT GTGAATGCAA
  R
  AAGCATGTAA ATGTCAAATT AAGATAATTC ATATGGCAAA ATTATTACAA GATAAACAAA
  ACTAGATAAA GGGATTAGAG AGTTGCCTAG AGACTTGTCC TCTAAACTCC TGGGACAGAA
  AAGGCATTCC AAGATGGCAC ATTCAAAGCA AGAAATGCCT GGAACTCTAG CTCTAGGGGA
  ATTTGATGCC TCTCGCCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51778156	NES14790930	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36495365					SNP	G	G	G	G	G	G	G	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51778156	NES14790930	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:96536573 () rs orientation: forward

Symbol	Name	Function Class
Gm26011	predicted gene, 26011	1149 bp downstream
Tafa1	TAFA chemokine like family member 1	within coordinates