rs36497640 SNP Detail

Summary

• ID
  rs36497640
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:123269411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTCTCCG CTTTCCAGGT
  TTGGGGATTA AAGGTCTATG CTATAATGCC AAGCAGCAGT TGGATTTCTT TAAGAAACTA
  TTTTTTTTCA TAAAGAAAAA GGAAAGGTAG TTGGAAATTT ATTTGCTCAT TTAGTTGGTT
  AATTTGGGAG ACTTGTTCTG CCTTTTTTTT TTTTGAGAGT GCTAGCACAG TTGTAACTGC
  M
  AAGAGGCCTA TGCTAAGAGC TACACTGCTT GGCTAGGCTT CCTGGCCTAC CACCAGCAGT
  TTCCGTTTGT GTTTCAGAAC CGGCTGGTCA AGAGCAGGCT ACAGGAAAAT ACTTTGTGGC
  ATTGGGGAGA AAAGTCTGAA ATTTTAAAGC CAGGGAGCAC AGATCCTCCA AAGCGAGTTC
  CTCAGTTAAC TTCTGAATGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	NZW/LacJ	WSB/EiJ
ss50808732	NES14203090	PERLEGEN	MM_PANEL2	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	NZW/LacJ	WSB/EiJ
rs36497640					SNP	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50808732	NES14203090	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:123269411 () rs orientation: forward

Symbol	Name	Function Class
Lars2	leucyl-tRNA synthetase, mitochondrial	within coordinates
Rr193658	regulatory region 193658	190 bp proximal
Rr203065	regulatory region 203065	481 bp proximal
Rr208064	regulatory region 208064	within coordinates