rs36497683 SNP Detail

Summary

• ID
  rs36497683
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:26300601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAACCAGT AGCTCTATTA
  TTAGATCTAC TCTGGTGGCC TTATCTTCAA CAACAGTTTA CACACTGTCC ATTACCCCAA
  GTTCAGATGA AACATCTCGT TGCTCCAGCT CCTACAGTAA CGGAGATAAG ACACTAATAG
  GATCTGATCC ACTGATCCAC TGATCCGGGA TCCAGGCTTA GCAGTGTATC TGTGCTGAGC
  R
  TCTTGGGCAG ATCACTGAAA CCTTCAGGCC CCAGGTTCTT CCAAAGTGAG TCAACTAATC
  AAAAAGCCCA GCCTTCTCTT TATCTAGTTA GCTGCTGTAG ACCAGTCCGT CCTTCAGGTC
  ATTTCAGTTG GACCTACCCA TACTACCAAC ATTCATCACT AAAACAATAG GCGTGGTACC
  TCTTCCAGCT TTGAGTGGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50513589	NES14089073	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36497683					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50513589	NES14089073	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:26300601 () rs orientation: forward

Symbol	Name	Function Class
Rr180623	regulatory region 180623	1000 bp proximal
Rr189143	regulatory region 189143	1802 bp distal
Rr189144	regulatory region 189144	1400 bp proximal
Star	steroidogenic acute regulatory protein	within coordinates
Tssr76717	transcription start site region 76717	1912 bp downstream
Tssr76718	transcription start site region 76718	699 bp downstream