rs36501837 SNP Detail

Summary

• ID
  rs36501837
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83105970 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAATAAGAT GACCTAAAAT ATTCTGATCT GACTCCAGGT
  AAAAGGAAAC AACCACCTAT GTTATGTGCC ATACTCTCTG ACCTCTCAAA TGCTTGTAAA
  R
  GCTGGCATTT CCTTCTCCAA TAACATGCTC GTTTTCTTAA ACCTTGAGTG TAAACAACAG
  CACCTTGCTT TTCATGGCCT ATTTATTGTT TGTCACATT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss51971134	NES14983050	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	A	A	A	G	A		G	G		A
ss145303854	ENSMUSSNP2951181	ENSEMBL	ENSEMBL_Sanger	f	SNP	A						A
ss322735863	CHEV_8_84903240	CHEVERUD	SCREENING_POP	f	SNP										A			G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs36501837					SNP	A	A	A	A	A	A	A	G	A	A	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51971134	NES14983050	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83105970 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Tssr81957	transcription start site region 81957			276 bp upstream
Tssr81958	transcription start site region 81958			260 bp upstream
Tssr81959	transcription start site region 81959			739 bp downstream
Tssr81960	transcription start site region 81960			924 bp downstream
Tssr81961	transcription start site region 81961			960 bp downstream