rs36505131 SNP Detail

Summary

• ID
  rs36505131
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:114968962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGATGTCTT GCACGGGAAT
  CTGCCACCTC GACTAGGGAT CCTAGTAAGT TTGCGGTGAT CACTGAGACA GACCTTGAAT
  AGCCATGAAT TATTTGTGGA AAGGTTGAAA AAGGCTTTAA AGGTGTGAGG GATGAAGGTT
  AAAATACATG ATTGGCTTGC ATTTTTTTAT TTTGTTTAAG AGATTTGCCC ATGGTTTCCC
  S
  CTTGAAGGTA TCAATGCTCT TAAAAGAATG GGAGCACGAT GGTGGTAGCA CTTTTCAAAA
  TTATTACAGA GAGTTGGGCC AGCAGTGAAT AATTGTTTGT TTGTTTGTTA GGTGTTTTTT
  TGGTTTTGGG GCGTGATTTT TTGAGGTTTT TTTTCTTTCT TTCTTTTTTT TTTTTTTTTT
  TTTTTTTTTT TTCGAAACAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51008724	NES13917015	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36505131					SNP	C	C	C	C	C	G	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51008724	NES13917015	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:114968962 () rs orientation: forward

Symbol	Name	Function Class
Rr375604	regulatory region 375604	1961 bp upstream