rs36506592 SNP Detail

Summary

• ID
  rs36506592
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94576293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTGAGGGG AGTCTGCTCA
  GAGAACCAGA AGGTAACGGC CCTCTCTCCC TTCCTTATCT TCCCTAGGCG GGTTCCAGCA
  CTGCTGTGGG GAACGTGCTC TCTGCCATGC ACGGGGTGTG GCGCTCACAG GGACTAGCCG
  GGTAAGGACA AAGCGAGCCC TCGGCTGCCT TGCCTCTTCT TCATTGGCTC TTTCTCAGGT
  Y
  CCTATGCTTG CTGTGGATGA ACACTTCGCC TTTGCCTTTT CTTAGGTTGC ATATGTAAGA
  TGGCACACTC GGCGACATAC CATTCTAGCC ACATGGTTCT CGGTCTTGTC CTTGACACTG
  GATGACATGC AAATGTGTGT CGTATTTTGG CTGCAGCATT GGTACAAATA AGCTCCCACC
  TACGCAGTGC AGACTGCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51765784	NES14793612	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36506592					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51765784	NES14793612	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94576293 () rs orientation: forward

Symbol	Name	Function Class
Rr137704	regulatory region 137704	1693 bp distal
Rr137705	regulatory region 137705	1708 bp proximal
Rr141882	regulatory region 141882	493 bp distal
Rr145329	regulatory region 145329	within coordinates
Rr151089	regulatory region 151089	1309 bp proximal
Slc25a26	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	within coordinates