rs36511140 SNP Detail

Summary

• ID
  rs36511140
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149757607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCACAGA GTTTTGGGTA
  GACCTTGGAA CTCTTCAGTT GAGTGGCCAG TGTCTAGTGA CAGAAACCAA TTTGGGGATG
  AAGTTGACCA TCAGCACATA CATAGGGATG ATGAACTCCC ATACATGTTG AAGTTAGCTA
  ACTATATCCC TATCCACTCC TGACTCTAAG CCTAAATAAT TGGAGTACAG GAAGTGGGTT
  K
  CTACAGCACA AACTTTCTGA ACTAGAAGAA CTATGCTTCA TTTCCTGCTG TGTGATGACC
  TTAGATAAAC TCAGAATGTC TGCCTTTTCA AAGGAGATGA TGAAAGGCAT TCAGAAAACT
  GAAAAACAAG TTCTTGTGTG AAGATATAGA TAATTACCAG TAGCTCTTAT AATTGGCTAA
  CACTTTAAAC TCTAAAACCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51056638	NES13434298	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36511140					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51056638	NES13434298	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149757607 () rs orientation: forward

Symbol	Name	Function Class
Rr587358	regulatory region 587358	1255 bp distal