rs36522846 SNP Detail

Summary

• ID
  rs36522846
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83596197 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGCCCTCCA CTGAGGAGCT CAGAACAGGA CGCAAAGAGA
  ACTGAATCCT CCTCCACTTA GAATTAGTCA ACGAGCCCGC CTTCCTCCTC ATGCCTGCCT
  W
  TCTGCCTTCT TTTCCTGTGA GATGTGTCTC ACTCTCTATC CAAGGCTGGC CATGAACTTG
  TAGGAAGCCT CCAGCCTCAG TTCACAAGTG GCTGGGATTG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss51353331	NES13744138	PERLEGEN	MM_PANEL2	f	SNP	T	T	A	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs36522846					SNP	T	T	A	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51353331	NES13744138	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83596197 () rs orientation: forward

Symbol	Name	Function Class
Gm67501	predicted gene, 67501	within coordinates
Rr632904	regulatory region 632904	1321 bp distal
Rr632905	regulatory region 632905	951 bp distal