rs36528128 SNP Detail

Summary

• ID
  rs36528128
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:102979883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCATGACA AACTTACACA
  TCAGAAGAGC TTATTTCCCC AAATTTGAAT ATCTGAACTT GCAGGGAGGG ACTTAAAAGA
  TATATTCAAA CCTGTCATTT ATATTATTTG ATCTACTAAA TTTAAGCCCA GGTCACTTAC
  TAAGTCATTT TCATTTCCAA TTGCAATATT TTACAAAATT TGAAATTGAA GACATATCTA
  K
  CTCTTTTTAA ATGAGTCCCA GGACAGCCAG AGCTACCGTG TCTCAAATAG ATAGAGATAG
  ATAGATATCT TCCCCAGTCC CTCTGCCTTG TTAAATAAAA CAACACAACA ACAACAACAA
  CAACAATAAC AACAACAACC ACCACCACCC CACTAGATTA CATTCCTAAA GCTAGCCACC
  AAGGTCTATT CCCTTATTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51145401	NES14335455	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	G	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36528128					SNP	T	T	T	T	G	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51145401	NES14335455	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:102979883 () rs orientation: forward

Symbol	Name	Function Class
Mast4	microtubule associated serine/threonine kinase family member 4	within coordinates
Rr485259	regulatory region 485259	694 bp distal
Tssr123856	transcription start site region 123856	589 bp downstream