rs36529320 SNP Detail

Summary

• ID
  rs36529320
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70927986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTCTTGT AGCCTGGCTC
  CTGCATCTTC CCATGCGCAT CTGTGGAGTT ATGCAGGCAC ATAGCTATTG CTTATGGCTT
  TTCACCCAAG TTATCTGAAA ACAATATCTT GATTGATTCT GATACCTTTC TCACACATCC
  CCAGCTCGCA AACAGTTGCT TAATCATCTT TGTGTATAGT AGTGTCCCCC ATTACTTATA
  M
  AATAGATTAT GCTCCCAAAC TCAACAGTGT CTGAATCACT AGGTGGGGCT GAGAGGCTCA
  AAAGTGCACA AGCCATAGGG AGTTAGCTCA GTGGTAAACC TGCACTGGTC CAGTTCTGGG
  TTCTAACTTC AATCCATAGT TCTAGAAACA GAAGGAAGCA AAGACAGAGC ATAAAAGCAT
  CTTTCCTGGG TGGGTCCAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51673413	NES14828342	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C		C	A	C	A	C
ss133273538	ENSMUSSNP60833	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36529320					SNP	C	C	C	C	C	C	C	C	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51673413	NES14828342	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70927986 () rs orientation: forward

Symbol	Name	Function Class
Gm66475	predicted gene, 66475	373 bp upstream
Gm66915	predicted gene, 66915	within coordinates
Tssr61339	transcription start site region 61339	292 bp downstream