rs36530613 SNP Detail

Summary

• ID
  rs36530613
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97965578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGGGAGGAA GCAGATGGGG AGTAGAAGGC TGTGTATACA
  CAAACACCGA GCCTAAGACA GGAAGGTGCT TGGTGCACTC AGGAGTCTTA ACATCAAGGA
  Y
  GAGCAGAAAA AAGGAGGTCA CAGGGAGGGA GACAAGGCCT CCTGCAAGTG CAAGCATCCA
  CTCTACACAC AGCCATGCTG GGCTCACCAA CAGACACGGC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51762612	NES14550095	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36530613					SNP	C	C	C	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51762612	NES14550095	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97965578 () rs orientation: forward

Symbol	Name	Function Class
Rr370004	regulatory region 370004	within coordinates
Senp1	SUMO1/sentrin specific peptidase 1	within coordinates