rs36532242 SNP Detail

Summary

• ID
  rs36532242
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75769010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTTACTGT GTGCATATTA
  TTTCTGCTTT TGTTGAAATA GGATCTTTCT TTGGAGTCCA AGCTTTCCTA GAACACACCG
  ATGAACTCAG GCTAAGCAGG ACAAGCATGC TTTAAACTTG TGATCCTTCC TTCTATCTCT
  ACTTGCTAAA TTTGATTAAC TTTAAAACAA AAGACAAAAA CAACAAAAAT ATATCAGTAT
  R
  CTACCTGAGA AAAAACTACT CACTAAATTT ATATTGGTCC AAGAGCCCTG CCAATAAGAA
  AACCAGAATA TGCCTCAGTG CTTAGAAGCC CTTATGGCTC TTGTAGAGGA CCTAATTTCA
  GGGTGCAGCC CTCACAAGGC AGCTTACAAC CTACTGAACC TCCAGTTCCA ACGGATCTGG
  TGCCCTCTTC TGGCCTCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51554960	NES14684351	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs36532242					SNP	A	A	A	A	A	A	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51554960	NES14684351	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75769010 () rs orientation: forward

Symbol	Name	Function Class
Rr397723	regulatory region 397723	within coordinates
Rr578364	regulatory region 578364	446 bp distal
Rr578365	regulatory region 578365	56 bp proximal
Rr578366	regulatory region 578366	177 bp proximal