rs3654737 SNP Detail

Summary

• ID
  rs3654737
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:105402871 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACTG TGAAATCTCT CTCATCCCCA
  Y
  CCCCCCACCC CCTGCTCTGC AGATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5030636	WI_WGS_9_106295436	WI	MOUSE	f	SNP		T	C
ss136919018	ENSMUSSNP5364884	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			T
ss323176741	CHEV_9_105428002	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3654737					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:105402871 () rs orientation: forward

Symbol	Name	Function Class
Rr198589	regulatory region 198589	930 bp proximal