rs3655333 SNP Detail

Summary

• ID
  rs3655333
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28778243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAG AGGCCAGAGG AGAAAGCTGC
  R
  TGTCTTCCTC TATCGCTCTC TGCTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5031232	WI_WGS_12_22815366	WI	MOUSE	f	SNP		A	G
ss137505129	ENSMUSSNP5051294	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			A
ss323972621	CHEV_12_29413109	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3655333					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28778243 () rs orientation: forward

Symbol	Name	Function Class
Rr269361	regulatory region 269361	1581 bp distal
Rr269362	regulatory region 269362	626 bp distal
Trappc12	trafficking protein particle complex 12	within coordinates