rs36557082 SNP Detail

Summary

• ID
  rs36557082
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137178401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGACTGGA AGAGGGTGTT
  GGATTCCCTG GAGCTGGAGC TGTGGAAAGT TGATAGCTAG CATGAGTGTG CTGAGAATTG
  AACCGAGCTT CTCTGCAAGA GCTGCAGGTA TTCTTAACCA CTGAGCCATC TTGCTGTTCT
  TGCAGAGAAC CCCGGTACAT AGAGAACTAT GCATTCATCA GAAACCATGA GATCATCTGC
  R
  ATTATGGAGG TATAAGCGTG ACAGAGCATC AGGACCAGCG AAGGCTGCCT CCTCATTGCA
  TCTCTAAGGC ATTCTGTGAT TGACTGCACA GTCTCCGCCC ACATGTCATA GATGATAAGC
  AAATGTAGCA AATGATATTT AGCGCTGATG GGTGTATAGA TACCAGAAAG ATCTCTGTCA
  GAGTCATTGC CCTACAGACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51382484	NES14469082	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36557082					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51382484	NES14469082	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137178401 () rs orientation: forward

Symbol	Name	Function Class
Gm19215	predicted gene, 19215	within coordinates
Gm37057	predicted gene, 37057	1479 bp upstream