rs36558637 SNP Detail

Summary

• ID
  rs36558637
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69763300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGAGGAAG CACTAGAATT AGAAAGCTGG
  GTAAGCTGAG GAGTCATGTT ACCTGAGTGG ATCTGAACAC AAGGCACACA GATCTTCCTC
  TTGGAATCAA GGGCAGGCAA ATCAAGTTtc aagaatgaca tcatagtttt cacttaagga
  M
  ctgcaaggga tggagtcatt aactgggtga caaaacaatg agactgaatt tcaaagtggg
  aacatcaaga atccactgtt tggaaatACC CACGTGGAAC TGTCTAATtg ttatgggaag
  cccatgagag gcgaccacac ctacagttta                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51261974	NES14268067	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	A	A	A	C	A	A	A		C	A	A	C		A
ss319782016	CHEV_1_69770715	CHEVERUD	SCREENING_POP	f	SNP											C					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36558637					SNP	A	A	C	A	A	A	C	A	A	A	C	C	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51261974	NES14268067	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69763300 () rs orientation: forward

Symbol	Name	Function Class
Gm70550	predicted gene, 70550	within coordinates
Rr371466	regulatory region 371466	within coordinates