AAATA CACTAAGGGG ATCTCATGAT K AATAGCAACA TTCTAAATAA CACAG K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51959755 | NES14967683 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | G | T | T | T | G | G | T | T | T | T | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36562600 | SNP | T | T | T | T | G | T | T | T | G | G | T | T | T | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51959755 | NES14967683 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr8:47386383 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm64146 | predicted gene, 64146 | 1476 bp downstream | ||||||
Rr663147 | regulatory region 663147 | 20 bp proximal | ||||||
Rr663148 | regulatory region 663148 | 1461 bp proximal | ||||||
Rr663149 | regulatory region 663149 | 1743 bp proximal | ||||||
Tssr77327 | transcription start site region 77327 | 1129 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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