GGACCCTGCC GGCTCTGGCT CCGTCTTCCT TAGTGTGCTT TGGACCTGGC CTTGGTCTCC CTGAAGCTCT GGCCGGGGAT GTGCAGCCAA CTCCCAGCCT TTCCTAATGA GCTGTCCTTG TGCAACTCCA AAAAGCTCTG CATTTCCAGA ATCAGGGGGA TTGCTCAGGC ATCCAGAGTG CACGCTGCTA ACACATGAGG K CCTGAGCTCC TATCCTTAAC ACCTAGAGAA CTCTCTCCCA GTAGCAGGTA AGGATAAAGA CCACTGATAT TCTCTGGCTC CCTGGATTGG CCTTTTCCAT CACAGTCCTT GCCATGAATT GTGGTCTAGA CTTAGGTCTG TATTATCTAC CAAGGCCAGT GTGCTTAGCT TTAACTGCCA TCTTGACATG ACCTAGAATC K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51500079 | NES13951203 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs36564947 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51500079 | NES13951203 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr7:72833902 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm20083 | predicted gene, 20083 | within coordinates | ||||||
Gm28746 | predicted gene 28746 | 860 bp downstream | ||||||
Tssr67187 | transcription start site region 67187 | 1612 bp upstream | ||||||
Tssr67188 | transcription start site region 67188 | 1644 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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