rs36566336 SNP Detail

Summary

• ID
  rs36566336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:25778721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTGTCTTA AACACTGGGG
  CTCATGAGGA TTTCAGGTTC TGGAGTTTTT CATATTGGAA TCTCTTATCT GCCTGGCCTC
  TCCTGATTGG CAGTCAGAAA TTCAAAAGTA CCCCAAGATC TGAATTTTTT TCTGTACTGA
  ACATTGATTT CTCCTACCCC AGTACTTGTT CATACATCCT ATATCCTACA CATAAGTTCT
  R
  CCTCCTACCT GCATCCCTAG CCCAGGAATC TGAATGAAGA TCTACTTCAT TTTATATTTA
  TGAGTGTTTT GTCTTATGTA TCTACTTCCT ATTACCGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTAC GCGTGTTTGA TAGCTATGTG GGTGCTAGGA ATTGAACCCT GGTCCTCTGG
  AAGAGGAACC TATGCCCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss51610534	NES14603642	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs36566336					SNP	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51610534	NES14603642	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:25778721 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6971	CpG island 6971	1239 bp proximal
Myo10	myosin X	within coordinates
Tssr130836	transcription start site region 130836	495 bp downstream
Tssr130837	transcription start site region 130837	1364 bp upstream