rs36567388 SNP Detail

Summary

• ID
  rs36567388
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:15783223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTGTGCT TTTAGGGGGA
  TGCATTGGCT CGTCCTTTTT TCATTGACAT CTTGATGACA AGTACAGCCA CTGGCTGCAG
  TAGGCTCTCA AGCACACACT GAGTAGCTGA GGAATTGGAC TAAGTTGCTT ATGTTCATTT
  CATCCAGTTC CTATTCCCAG ATACAAAACT GAATAACAGA ATGCTGATAA CAGGCTCCAG
  R
  CCGTGACTGA CAAAATTAAG TAATATACCT CCGAGAAGCG TTTGCAATGA TGCTTGTTTT
  TTTTAATTGT GGTAAAAAAA TTTATATATA TATATATATA TTGCTATCTA AAGTATAAGG
  TTCAATAGTG TTAAATGTGT GTGTTATCGT TATAACCTTT TCATCTTATG AAACTGAAAC
  TCTATAGCCA TCAAGAAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50640760	NES13617905	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36567388					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50640760	NES13617905	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:15783223 () rs orientation: forward

Symbol	Name	Function Class
Gm50348	predicted gene, 50348	within coordinates
Rr406864	regulatory region 406864	1191 bp distal
Rr544634	regulatory region 544634	1975 bp distal