rs36567485 SNP Detail

Summary

• ID
  rs36567485
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:81934035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGTTTGAG AACTCTGCTA
  TGAGGACATC AATTCCCCAG CTAGAAAACT TCATTAAGTT TTTGTTGCAG TCTGCACAGA
  AATTATCCTC AAGTGAATTC AGGTAATGCT CACTTAATTT TTCACCTCCA AAGCATTGTG
  CAAAGATTTT TAATGTTAGC GGTTTTAAGG AAGTTTTGCA CTTTTACTAT AATTTTTAAA
  W
  CTGGGTCTTG GGATATAGCC AGTTTAATGG AGGATTTGCC CAGCAACAAG AGGCCCTGGG
  TTCAATCTAA ACACTCATCA GCCAGGCATT GTGGCACAAG CCTGGAATCC TTCCGTAGTG
  TTGAGGAAGT GTCGATGTGA CTGCTCCCAT CAGCTGCCAG CATAGTGACC ACTGAAGCTG
  CCAGCACAGC ACTGTGGAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51348121	NES13741154	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36567485					SNP	T	T	T	T	T	T	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51348121	NES13741154	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:81934035 () rs orientation: forward

Symbol	Name	Function Class
Gcfc2	GC-rich sequence DNA binding factor 2	within coordinates
Mrpl19	mitochondrial ribosomal protein L19	797 bp downstream
Rr632566	regulatory region 632566	448 bp distal