rs3657072 SNP Detail

Summary

• ID
  rs3657072
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:94268117 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G TGACTCAATG CTCCAAGGTA TGCTAATCAT AAAACAGATT
  GCGACATTCC TCCACCCACC TGCTTCCTGG GTTCAAAGAG TGTTCATTCA AAGAAAGTCA
  Y
  CCTGCCCCAC CCTGACCATT GCTGGAACCT GCAATGCAAA TGTGCTATCC TTAGGGGCTC
  TAAGAAACTG TCTTGAGAAA TAACCCTCAC AATTACCAGG T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5032976	WI_WGS_5_25503497	WI	MOUSE	f	SNP	T			C
ss148152349	ENSMUSSNP3578227	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3657072					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:94268117 () rs orientation: reverse

Symbol	Name	Function Class
Rr382481	regulatory region 382481	within coordinates