rs36574515 SNP Detail

Summary

• ID
  rs36574515
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:39805689 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCTTCTTT AGGTCCAACA
  CTGCAGTTAG GAGGAGGATC AAGGGTGATC TCAGCTAGCT CCTTCTGAAT TCTTTTAGCA
  TTAGTGGATA ACTTAGCAGT CGTTTTGCTG GAGACTTTGG TGTTTTGTTT CTGCTGGGTG
  GCAGAAGGTT TTCTATCTTC CTGTTCCTCG GGCTCTGGAG CAGCAGGGTC TCGCTGGTCT
  K
  CATCTGAACT GCCACTGCTG GGCAGTCATC CGACCTTTGC CTGTCACTGG ACATCTCGGT
  GAAGTTATTT CTGTGAAAAC TTACAAATGG GCTATCTGCT GGTGTATGCT AGACGCATAA
  GCTTCTTCCA AAATTCATGT GTCCAGAGCC AAGTCTCACT TTCTGCCAAG AGCTCCATGT
  CTGGAAAGAT TCCCCACTAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51614694	NES14840533	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	G	G	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36574515					SNP	T	T	T	T	T	T	G	T	T	G	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51614694	NES14840533	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:39805689 () rs orientation: forward

Symbol	Name	Function Class
Gm7554	predicted gene 7554	within coordinates