rs36578355 SNP Detail

Summary

• ID
  rs36578355
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:39145801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCTCAGG ATCCAAAGCA
  GCTCCCACAA AGTCCCAGCC CCAGGCCATT ACTGGCTCTG CCATGCAAGC TGGATTTAGA
  CAGGGAACTT TGTTTCTTTT CAATACATGA GGGCCTCAGG ACAAAGCTTC CAAGGCTCTA
  ATCCGGGCTA TACTGGCTCT GCCAAGCATG TTCCTGGTTC ATTTTCCTTG CATCTGGGCT
  W
  CAGGGATAGC CTTGAATGAG CCCAACCCTC AACAATCAAC CATGGGAAGT AGGAGATGAG
  ATTAAAACCT TACCTGTAGG AACAAACAAA GTATGTCCCT GCTTTACCAC ACATTTGTAG
  CATTTATCTA CTTTATCTCC AAAGAACACC TCACTCTGGG TCACAGATGA ACTCCAAGAT
  TCATAGAGTG CCAAATTTTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51608130	NES14845904	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	T	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36578355					SNP	A	A	A	A	A	A	A	A	T	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51608130	NES14845904	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:39145801 () rs orientation: forward

Symbol	Name	Function Class
Gm67109	predicted gene, 67109	1654 bp upstream
Kdm7a	lysine (K)-specific demethylase 7A	within coordinates