rs36580791 SNP Detail

Summary

• ID
  rs36580791
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35747092 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAAGGAAG GAAAGGAAAA
  ACTGCTATAG TGAAAATCTT GCAGTACTGA AGAAAGAGAG TGAAAGACTC TAAAAGGTAG
  AGTGGTCACA TGTGTGCATC AAGGGAAGCA GTCATCAAAG TACAGAGAGC ACATAGGCTG
  AAAAGTCTTT GACACATAAA ATCAACCATG GGGTAAACAT TAAATATCAA AAGTAATTCC
  S
  TTGAATGGGC TAGCAAATCG AACAGTTATT TCTCACAGGC AAAAATTATG AGGTCCAATA
  GATTTTGAAA AATTGTTCAA AATTTTTAGC CACTAGAGAA ATGCAAAATA AACCTGCTTT
  GAGATTCTGT TTCACCACAG TCAGAATGCC TGTCACCAAG AAAACAAATG AAAAAAACAA
  AAACAAAAAC AAAAAACAAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50672082	NES14009006	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C		C	C	C	C		G
ss322901339	CHEV_9_35643381	CHEVERUD	SCREENING_POP	f	SNP											G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36580791					SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50672082	NES14009006	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:35747092 () rs orientation: forward

Symbol	Name	Function Class
Gm36974	predicted gene, 36974	within coordinates