rs36583928 SNP Detail

Summary

• ID
  rs36583928
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:49902812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGAGACA CACCTTATGG
  CATTGGCCTT GTTACAACAC ATAAATTTTT ACTTTCCCTT AACTGGTAAA GTATGAGTTA
  CGGAGTCCTA CCTAATAACA AATGAGACTG GACAAGTCTG GTGTGCTGAC ACTGCCAGGC
  ATTGGGTACA AACTCACTGC CATGCAGGAA GGGGACAAAT TTGATGGGCA GTTTTCTATC
  K
  TAGACATCTG TTGTCCTCCT ATTGGATACG TAGCTCTCTG TCCCTGTAAT GGTTTGGGTA
  TGAAGTGTCT AGCACAGAGT CATATGTTTG AACATGGTCC CAGTTGTTGG TACTGTTTGG
  GAGGTCGCAA TTCCTATTGG GTGTATGGCC TAGCTGGCAA ACATAGGCCC TTAAGGGCAG
  GGATTAAGGG TTATAGGACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51109895	NES14349784	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36583928					SNP	T	T	T	T	T	T	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51109895	NES14349784	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:49902812 () rs orientation: forward

Symbol	Name	Function Class
Gm19334	predicted gene, 19334	1827 bp upstream