rs36587194 SNP Detail

Summary

• ID
  rs36587194
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:26471643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAAACCCT GACCTATTAA AAGATCAGTC CCTCGTCCCT
  CTCTCCATAA CCTCCCCCAC ATCTACCACC TACCCTGCCA CACACAGTCT GACTTCTGTG
  K
  CAATGGACTG ACCTGACTCC ATGTGTCTTG TAGAAAAAGC AACAATGTGA TCTTTTGTCA
  GCTGTCCCTG CTTCTCAGGT CCCTGTACTG TGCGGGCCAC                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51885205	NES14904428	PERLEGEN	MM_PANEL2	f	SNP	T	T	G	T	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36587194					SNP	T	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51885205	NES14904428	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:26471643 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b19	cytochrome P450, family 2, subfamily b, polypeptide 19	within coordinates
D7Mit144	DNA segment, Chr 7, Massachusetts Institute of Technology 144	388 bp proximal
Gm51442	predicted gene, 51442	within coordinates
Rr643909	regulatory region 643909	1024 bp proximal
Tssr65194	transcription start site region 65194	417 bp downstream